IL_8UU8_108
3D structure
- PDB id
- 8UU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8UU8|1|A|U|2722, 8UU8|1|A|A|2723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU8_108 not in the Motif Atlas
- Homologous match to IL_5J7L_348
- Geometric discrepancy: 0.101
- The information below is about IL_5J7L_348
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
8UU8|1|A|U|2720
8UU8|1|A|G|2721
8UU8|1|A|U|2722
8UU8|1|A|A|2723
8UU8|1|A|C|2724
*
8UU8|1|A|G|2751
8UU8|1|A|G|2752
8UU8|1|A|U|2753
8UU8|1|A|A|2754
8UU8|1|A|G|2755
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain P
- Large ribosomal subunit protein bL17
- Chain R
- Large ribosomal subunit protein bL19
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