3D structure

PDB id
8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAAAUCC*GAACUG
Length
14 nucleotides
Bulged bases
8UZ3|1|2|U|632
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8UZ3_131 not in the Motif Atlas
Geometric match to IL_5J7L_030
Geometric discrepancy: 0.2755
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

8UZ3|1|2|U|605
8UZ3|1|2|G|606
8UZ3|1|2|A|607
8UZ3|1|2|A|608
8UZ3|1|2|A|609
8UZ3|1|2|U|610
8UZ3|1|2|C|611
8UZ3|1|2|C|612
*
8UZ3|1|2|G|628
8UZ3|1|2|A|629
8UZ3|1|2|A|630
8UZ3|1|2|C|631
8UZ3|1|2|U|632
8UZ3|1|2|G|633

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain i
30S ribosomal protein S4
Chain m
30S ribosomal protein S8
Chain u
30S ribosomal protein S16
Chain v
30S ribosomal protein S17

Coloring options:


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