IL_8VVQ_238

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

8VVQ|1|ZA|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|ZA|G|1281
8VVQ|1|ZA|A|1282
8VVQ|1|ZA|C|1283
8VVQ|1|ZA|A|1284
8VVQ|1|ZA|G|1285
8VVQ|1|ZA|G|1286
8VVQ|1|ZA|A|1287
8VVQ|1|ZA|U|1288
8VVQ|1|ZA|U|1289
8VVQ|1|ZA|G|1290
*
8VVQ|1|ZA|C|1309
8VVQ|1|ZA|U|1310
8VVQ|1|ZA|C|1311
8VVQ|1|ZA|G|1312
8VVQ|1|ZA|A|1313
8VVQ|1|ZA|U|1314
8VVQ|1|ZA|U|1315
8VVQ|1|ZA|C|1316

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain FC

S27A

Chain KB

S10

Chain MB

S12