IL_8VVT_140

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACAU(PSU)U*AC(B8T)AU

Length

11 nucleotides

Bulged bases

8VVT|1|WA|C|4675, 8VVT|1|WA|B8T|4676

QA status

Modified nucleotides: PSU, B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|A|4629
8VVT|1|WA|C|4630
8VVT|1|WA|A|4631
8VVT|1|WA|U|4632
8VVT|1|WA|PSU|4633
8VVT|1|WA|U|4634
*
8VVT|1|WA|A|4674
8VVT|1|WA|C|4675
8VVT|1|WA|B8T|4676
8VVT|1|WA|A|4677
8VVT|1|WA|U|4678

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain U

L23

Chain V

L24