IL_8VVT_212
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVT_212 not in the Motif Atlas
- Geometric match to IL_8P9A_421
- Geometric discrepancy: 0.1391
- The information below is about IL_8P9A_421
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
8VVT|1|ZA|G|942
8VVT|1|ZA|U|943
8VVT|1|ZA|A|944
8VVT|1|ZA|U|945
*
8VVT|1|ZA|A|981
8VVT|1|ZA|G|982
8VVT|1|ZA|A|983
8VVT|1|ZA|C|984
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain A
- L8
- Chain BB
- S3A
- Chain OA
- eL43
- Chain OB
- uS11
Coloring options: