IL_8WV1_041
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CGCAAU*AGCG
- Length
- 10 nucleotides
- Bulged bases
- 8WV1|1|A|G|1378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_041 not in the Motif Atlas
- Geometric match to IL_5TBW_062
- Geometric discrepancy: 0.2388
- The information below is about IL_5TBW_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51005.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8WV1|1|A|C|1364
8WV1|1|A|G|1365
8WV1|1|A|C|1366
8WV1|1|A|A|1367
8WV1|1|A|A|1368
8WV1|1|A|U|1369
*
8WV1|1|A|A|1377
8WV1|1|A|G|1378
8WV1|1|A|C|1379
8WV1|1|A|G|1380
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain R
- 50S ribosomal protein L22
- Chain S
- 50S ribosomal protein L23
Coloring options: