IL_9AXU_131
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- UAAU*AUCGA
- Length
- 9 nucleotides
- Bulged bases
- 9AXU|1|4|G|103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AXU_131 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3485
- The information below is about IL_1GID_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9AXU|1|4|U|72
9AXU|1|4|A|73
9AXU|1|4|A|74
9AXU|1|4|U|75
*
9AXU|1|4|A|100
9AXU|1|4|U|101
9AXU|1|4|C|102
9AXU|1|4|G|103
9AXU|1|4|A|104
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- Large ribosomal subunit protein uL24
- Chain t
- Large ribosomal subunit protein uL29
- Chain v
- Large ribosomal subunit protein eL37B
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