IL_9B24_031
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|A|A|682
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_031 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.3067
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9B24|1|A|U|664
9B24|1|A|G|665
9B24|1|A|U|666
9B24|1|A|A|667
9B24|1|A|G|668
*
9B24|1|A|C|679
9B24|1|A|G|680
9B24|1|A|C|681
9B24|1|A|A|682
9B24|1|A|G|683
9B24|1|A|A|684
9B24|1|A|U|685
9B24|1|A|A|686
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: