IL_9B24_050
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_050 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.2195
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|C|1413
9B24|1|A|C|1414
9B24|1|A|G|1415
9B24|1|A|A|1416
9B24|1|A|A|1417
9B24|1|A|G|1418
*
9B24|1|A|C|1450
9B24|1|A|G|1451
9B24|1|A|A|1452
9B24|1|A|A|1453
9B24|1|A|G|1454
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain T
- Small ribosomal subunit protein bS20
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
- Chain g
- Large ribosomal subunit protein uL14
- Chain l
- Large ribosomal subunit protein bL19
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