IL_9B24_093
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9B24|1|Y|A|1275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_093 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1456
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9B24|1|Y|C|1116
9B24|1|Y|U|1117
9B24|1|Y|A|1118
9B24|1|Y|A|1119
9B24|1|Y|G|1120
*
9B24|1|Y|C|1272
9B24|1|Y|G|1273
9B24|1|Y|A|1274
9B24|1|Y|A|1275
9B24|1|Y|G|1276
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain U
- 5S ribosomal RNA; 5S rRNA
- Chain m
- Large ribosomal subunit protein bL20
- Chain n
- Large ribosomal subunit protein bL21
- Chain w
- Large ribosomal subunit protein uL30
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