IL_9B24_096
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|Y|C|1260, 9B24|1|Y|A|1262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_096 not in the Motif Atlas
- Homologous match to IL_5J7L_280
- Geometric discrepancy: 0.1426
- The information below is about IL_5J7L_280
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
9B24|1|Y|C|1136
9B24|1|Y|U|1137
9B24|1|Y|A|1138
9B24|1|Y|A|1139
9B24|1|Y|G|1140
9B24|1|Y|U|1141
9B24|1|Y|G|1142
*
9B24|1|Y|C|1258
9B24|1|Y|U|1259
9B24|1|Y|C|1260
9B24|1|Y|A|1261
9B24|1|Y|A|1262
9B24|1|Y|G|1263
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain d
- Large ribosomal subunit protein uL6
- Chain f
- Large ribosomal subunit protein uL13
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