IL_9BH5_183
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 9BH5|1|B2|G|841
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_183 not in the Motif Atlas
- Geometric match to IL_4V88_431
- Geometric discrepancy: 0.1174
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
9BH5|1|B2|C|839
9BH5|1|B2|G|840
9BH5|1|B2|G|841
9BH5|1|B2|G|842
9BH5|1|B2|G|843
*
9BH5|1|B2|C|915
9BH5|1|B2|A|916
9BH5|1|B2|A|917
9BH5|1|B2|G|918
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AB
- Small ribosomal subunit protein eS1
- Chain AN
- Small ribosomal subunit protein uS15
- Chain Aa
- Small ribosomal subunit protein eS26
- Chain Ab
- Small ribosomal subunit protein eS27
- Chain Cc
- Large ribosomal subunit protein eL30
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