IL_9BH5_194
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9BH5|1|B2|C|1117, 9BH5|1|B2|C|1118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_194 not in the Motif Atlas
- Homologous match to IL_8C3A_449
- Geometric discrepancy: 0.0679
- The information below is about IL_8C3A_449
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.10
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 16
Unit IDs
9BH5|1|B2|A|1116
9BH5|1|B2|C|1117
9BH5|1|B2|C|1118
9BH5|1|B2|A|1119
*
9BH5|1|B2|U|1573
9BH5|1|B2|C|1574
9BH5|1|B2|C|1575
9BH5|1|B2|C|1576
9BH5|1|B2|U|1577
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain Ac
- Small ribosomal subunit protein eS28
- Chain DA
- Transfer RNA; tRNA
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