IL_9BH5_207
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GUC*GUAAAC
- Length
- 9 nucleotides
- Bulged bases
- 9BH5|1|B2|A|1472, 9BH5|1|B2|A|1473
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_207 not in the Motif Atlas
- Geometric match to IL_5J7L_055
- Geometric discrepancy: 0.2022
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9BH5|1|B2|G|1444
9BH5|1|B2|U|1445
9BH5|1|B2|C|1450
*
9BH5|1|B2|G|1469
9BH5|1|B2|U|1470
9BH5|1|B2|A|1471
9BH5|1|B2|A|1472
9BH5|1|B2|A|1473
9BH5|1|B2|C|1474
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AD
- Small ribosomal subunit protein uS3
- Chain AT
- Small ribosomal subunit protein eS19
- Chain AU
- Small ribosomal subunit protein uS10
- Chain Ad
- Small ribosomal subunit protein uS14
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