IL_9C3H_076
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 9C3H|1|L5|U|1930, 9C3H|1|L5|C|1931, 9C3H|1|L5|G|2055, 9C3H|1|L5|A|2057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_076 not in the Motif Atlas
- Homologous match to IL_8C3A_054
- Geometric discrepancy: 0.2334
- The information below is about IL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9C3H|1|L5|C|1926
9C3H|1|L5|U|1927
9C3H|1|L5|C|1928
9C3H|1|L5|A|1929
9C3H|1|L5|U|1930
9C3H|1|L5|C|1931
9C3H|1|L5|A|1932
9C3H|1|L5|G|1933
*
9C3H|1|L5|C|2053
9C3H|1|L5|U|2054
9C3H|1|L5|G|2055
9C3H|1|L5|G|2056
9C3H|1|L5|A|2057
9C3H|1|L5|G|2058
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LH
- Large ribosomal subunit protein uL6
- Chain LM
- Large ribosomal subunit protein eL14
- Chain LS
- Large ribosomal subunit protein eL20
- Chain LY
- Large ribosomal subunit protein uL13
- Chain Lo
- Large ribosomal subunit protein eL40
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