IL_9C3H_146

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

ACAU(PSU)U*ACCA(PSU)

Length

11 nucleotides

Bulged bases

9C3H|1|L5|C|4670, 9C3H|1|L5|C|4671

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|A|4624
9C3H|1|L5|C|4625
9C3H|1|L5|A|4626
9C3H|1|L5|U|4627
9C3H|1|L5|PSU|4628
9C3H|1|L5|U|4629
*
9C3H|1|L5|A|4669
9C3H|1|L5|C|4670
9C3H|1|L5|C|4671
9C3H|1|L5|A|4672
9C3H|1|L5|PSU|4673

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

Large ribosomal subunit protein uL14

Chain LW

Large ribosomal subunit protein eL24