IL_9C3H_179
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- UACGCAC*GUGAAA
- Length
- 13 nucleotides
- Bulged bases
- 9C3H|1|S2|C|65, 9C3H|1|S2|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_179 not in the Motif Atlas
- Geometric match to IL_2NPY_001
- Geometric discrepancy: 0.397
- The information below is about IL_2NPY_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.2
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9C3H|1|S2|U|63
9C3H|1|S2|A|64
9C3H|1|S2|C|65
9C3H|1|S2|G|66
9C3H|1|S2|C|67
9C3H|1|S2|A|68
9C3H|1|S2|C|69
*
9C3H|1|S2|G|80
9C3H|1|S2|U|81
9C3H|1|S2|G|82
9C3H|1|S2|A|83
9C3H|1|S2|A|84
9C3H|1|S2|A|85
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LW
- Large ribosomal subunit protein eL24
- Chain SG
- Small ribosomal subunit protein eS6
- Chain SY
- Isoform 3 of Small ribosomal subunit protein eS24
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