IL_9E0N_058

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

9E0N|1|A|U|1641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_058 not in the Motif Atlas

Geometric match to IL_9DFE_009

Geometric discrepancy: 0.2478

The information below is about IL_9DFE_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9E0N|1|A|C|1638
9E0N|1|A|G|1639
9E0N|1|A|A|1640
9E0N|1|A|U|1641
9E0N|1|A|G|1642
*
9E0N|1|A|C|1797
9E0N|1|A|U|1798
9E0N|1|A|A|1799
9E0N|1|A|G|1800

Current chains

Chain A

23S rRNA

Nearby chains