IL_9E16_152
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 9E16|1|a|A|693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_152 not in the Motif Atlas
- Homologous match to IL_8B0X_034
- Geometric discrepancy: 0.2782
- The information below is about IL_8B0X_034
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9E16|1|a|U|675
9E16|1|a|G|676
9E16|1|a|U|677
9E16|1|a|A|678
9E16|1|a|G|679
*
9E16|1|a|C|690
9E16|1|a|G|691
9E16|1|a|C|692
9E16|1|a|A|693
9E16|1|a|G|694
9E16|1|a|A|695
9E16|1|a|U|696
9E16|1|a|A|697
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: