IL_9F58_041
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_041 not in the Motif Atlas
- Homologous match to IL_8CRE_044
- Geometric discrepancy: 0.0969
- The information below is about IL_8CRE_044
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
9F58|1|a|A|1006
9F58|1|a|U|1007
9F58|1|a|U|1008
9F58|1|a|A|1009
*
9F58|1|a|U|1041
9F58|1|a|U|1042
9F58|1|a|C|1043
9F58|1|a|U|1044
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain H
- eIF-2-alpha kinase GCN2
- Chain e
- 60S ribosomal protein L5
- Chain j
- 60S ribosomal protein L10
Coloring options: