IL_9F58_117
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 9F58|1|a|U|3056, 9F58|1|a|U|3058
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_117 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.0704
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98200.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9F58|1|a|U|3054
9F58|1|a|U|3055
9F58|1|a|U|3056
9F58|1|a|U|3057
9F58|1|a|U|3058
9F58|1|a|G|3059
*
9F58|1|a|C|3084
9F58|1|a|G|3085
9F58|1|a|A|3086
9F58|1|a|A|3087
9F58|1|a|G|3088
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain O
- 60S ribosomal protein L31-A
- Chain d
- 60S ribosomal protein L3
- Chain y
- 60S ribosomal protein L24-A
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