IL_9FIB_032
3D structure
- PDB id
- 9FIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S-IF1-IF3-mRNA-GE81112A complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 9FIB|1|B|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9FIB_032 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.0952
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9FIB|1|B|U|684
9FIB|1|B|G|685
9FIB|1|B|U|686
9FIB|1|B|A|687
9FIB|1|B|G|688
*
9FIB|1|B|C|699
9FIB|1|B|G|700
9FIB|1|B|U|701
9FIB|1|B|A|702
9FIB|1|B|G|703
9FIB|1|B|A|704
9FIB|1|B|G|705
9FIB|1|B|A|706
Current chains
- Chain B
- 16S rRNA
Nearby chains
- Chain J
- Translation initiation factor IF-3
- Chain K
- Small ribosomal subunit protein uS11
Coloring options: