IL_9G33_007

3D structure

PDB id

9G33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stalled 90S - Utp23-Krr1-deltaC3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GCG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9G33_007 not in the Motif Atlas

Geometric match to IL_7QQP_008

Geometric discrepancy: 0.2018

The information below is about IL_7QQP_008

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

9G33|1|D2|G|171
9G33|1|D2|C|172
9G33|1|D2|G|173
*
9G33|1|D2|C|223
9G33|1|D2|G|224
9G33|1|D2|U|225

Current chains

Chain D2

5' ETS

Nearby chains

Chain UD

U3 small nucleolar RNA-associated protein 4