IL_9G6J_191
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|A|C|1081, 9G6J|1|A|U|1083, 9G6J|1|A|G|1085
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_191 not in the Motif Atlas
- Homologous match to IL_8CRE_439
- Geometric discrepancy: 0.0811
- The information below is about IL_8CRE_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9G6J|1|A|C|1019
9G6J|1|A|G|1020
9G6J|1|A|A|1021
*
9G6J|1|A|U|1080
9G6J|1|A|C|1081
9G6J|1|A|U|1082
9G6J|1|A|U|1083
9G6J|1|A|U|1084
9G6J|1|A|G|1085
9G6J|1|A|G|1086
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain D
- Ribosomal 40S subunit protein S2
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain O
- Ribosomal 40S subunit protein S13
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- Ribosomal 40S subunit protein S23B
- Chain c
- 40S ribosomal protein S27
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