IL_9G6J_215
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GUAUAAGC*GAAAUC
- Length
- 14 nucleotides
- Bulged bases
- 9G6J|1|A|A|1476, 9G6J|1|A|A|1479, 9G6J|1|A|A|1503, 9G6J|1|A|U|1504
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_215 not in the Motif Atlas
- Homologous match to IL_8CRE_463
- Geometric discrepancy: 0.1969
- The information below is about IL_8CRE_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22564.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9G6J|1|A|G|1474
9G6J|1|A|U|1475
9G6J|1|A|A|1476
9G6J|1|A|U|1477
9G6J|1|A|A|1478
9G6J|1|A|A|1479
9G6J|1|A|G|1480
9G6J|1|A|C|1481
*
9G6J|1|A|G|1500
9G6J|1|A|A|1501
9G6J|1|A|A|1502
9G6J|1|A|A|1503
9G6J|1|A|U|1504
9G6J|1|A|C|1505
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain e
- Ribosomal 40S subunit protein S29A
Coloring options: