IL_9GFT_067
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUC*GAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_067 not in the Motif Atlas
- Homologous match to IL_5E81_371
- Geometric discrepancy: 0.2821
- The information below is about IL_5E81_371
- Detailed Annotation
- Self complementary
- Broad Annotation
- Self complementary
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
9GFT|1|A3|A|29
9GFT|1|A3|U|30
9GFT|1|A3|C|31
*
9GFT|1|A3|G|41
9GFT|1|A3|A|42
9GFT|1|A3|U|43
Current chains
- Chain A3
- A-site tRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: