IL_9GHH_141
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAAAGCC*GAGGG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_141 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.1813
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9GHH|1|a|U|613
9GHH|1|a|G|614
9GHH|1|a|A|615
9GHH|1|a|A|616
9GHH|1|a|A|617
9GHH|1|a|G|618
9GHH|1|a|C|619
9GHH|1|a|C|620
*
9GHH|1|a|G|636
9GHH|1|a|A|637
9GHH|1|a|G|638
9GHH|1|a|G|639
9GHH|1|a|G|640
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
- Chain i
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S16
Coloring options: