IL_9GHH_146
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGUAG*CGCAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 9GHH|1|a|A|710
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_146 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.2758
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9GHH|1|a|U|692
9GHH|1|a|G|693
9GHH|1|a|U|694
9GHH|1|a|A|695
9GHH|1|a|G|696
*
9GHH|1|a|C|707
9GHH|1|a|G|708
9GHH|1|a|C|709
9GHH|1|a|A|710
9GHH|1|a|G|711
9GHH|1|a|A|712
9GHH|1|a|G|713
9GHH|1|a|A|714
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S11
Coloring options: