IL_9GHH_175
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_175 not in the Motif Atlas
- Geometric match to IL_3BBM_001
- Geometric discrepancy: 0.3642
- The information below is about IL_3BBM_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80926.1
- Basepair signature
- cWW-cWW-tSH-tHS-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9GHH|1|a|C|1440
9GHH|1|a|C|1441
9GHH|1|a|G|1442
9GHH|1|a|A|1443
9GHH|1|a|A|1444
9GHH|1|a|G|1445
*
9GHH|1|a|C|1477
9GHH|1|a|G|1478
9GHH|1|a|A|1479
9GHH|1|a|A|1480
9GHH|1|a|G|1481
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 50S ribosomal protein L19
- Chain u
- 30S ribosomal protein S20
Coloring options: