IL_9GMO_081
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- (OMU)GAAC*GAA
- Length
- 8 nucleotides
- Bulged bases
- 9GMO|1|A|A|2428
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_081 not in the Motif Atlas
- Homologous match to IL_8C3A_482
- Geometric discrepancy: 0.3564
- The information below is about IL_8C3A_482
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_04395.1
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9GMO|1|A|OMU|2415
9GMO|1|A|G|2416
9GMO|1|A|A|2417
9GMO|1|A|A|2418
9GMO|1|A|C|2419
*
9GMO|1|A|G|2427
9GMO|1|A|A|2428
9GMO|1|A|A|2429
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain 0
- Cytoplasmic 60S subunit biogenesis factor ZNF622
- Chain J
- 60S ribosomal protein L17
- Chain L
- 60S ribosomal protein L19
- Chain f
- 60S ribosomal protein L39
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