IL_9GMO_101
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 9GMO|1|A|A|3663, 9GMO|1|A|U|3679, 9GMO|1|A|C|3683
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_101 not in the Motif Atlas
- Homologous match to IL_8C3A_088
- Geometric discrepancy: 0.1043
- The information below is about IL_8C3A_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GMO|1|A|C|3660
9GMO|1|A|G|3661
9GMO|1|A|A|3662
9GMO|1|A|A|3663
9GMO|1|A|G|3664
9GMO|1|A|G|3665
*
9GMO|1|A|U|3677
9GMO|1|A|G|3678
9GMO|1|A|U|3679
9GMO|1|A|U|3680
9GMO|1|A|G|3681
9GMO|1|A|A|3682
9GMO|1|A|C|3683
9GMO|1|A|G|3684
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain j
- 60S ribosomal protein L37a
Coloring options: