IL_9I3L_032
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGGUAG*CGAAUAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I3L_032 not in the Motif Atlas
- Geometric match to IL_8B0X_090
- Geometric discrepancy: 0.0351
- The information below is about IL_8B0X_090
- Detailed Annotation
- 7x7 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_94128.2
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9I3L|1|b|G|858
9I3L|1|b|G|859
9I3L|1|b|G|860
9I3L|1|b|G|861
9I3L|1|b|U|862
9I3L|1|b|A|863
9I3L|1|b|G|864
*
9I3L|1|b|C|917
9I3L|1|b|G|918
9I3L|1|b|A|919
9I3L|1|b|A|920
9I3L|1|b|U|921
9I3L|1|b|A|922
9I3L|1|b|C|923
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein uL30
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain m
- 50S ribosomal protein L16
- Chain y
- Large ribosomal subunit protein bL27
Coloring options: