IL_9I3L_108
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 9I3L|1|b|U|2693, 9I3L|1|b|U|2694
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I3L_108 not in the Motif Atlas
- Homologous match to IL_7A0S_096
- Geometric discrepancy: 0.1933
- The information below is about IL_7A0S_096
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9I3L|1|b|U|2691
9I3L|1|b|G|2692
9I3L|1|b|U|2693
9I3L|1|b|U|2694
9I3L|1|b|C|2695
*
9I3L|1|b|G|2722
9I3L|1|b|G|2723
9I3L|1|b|U|2724
9I3L|1|b|A|2725
9I3L|1|b|G|2726
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain n
- Large ribosomal subunit protein bL17
- Chain p
- Large ribosomal subunit protein bL19
Coloring options: