IL_9N6Z_043
3D structure
- PDB id
- 9N6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.74 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 9N6Z|1|L1|G|913
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6Z_043 not in the Motif Atlas
- Homologous match to IL_9SUM_182
- Geometric discrepancy: 0.3019
- The information below is about IL_9SUM_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43424.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9N6Z|1|L1|U|893
9N6Z|1|L1|U|894
9N6Z|1|L1|G|895
9N6Z|1|L1|U|896
9N6Z|1|L1|C|897
9N6Z|1|L1|A|898
9N6Z|1|L1|G|899
*
9N6Z|1|L1|C|910
9N6Z|1|L1|U|911
9N6Z|1|L1|U|912
9N6Z|1|L1|G|913
9N6Z|1|L1|G|914
9N6Z|1|L1|A|915
9N6Z|1|L1|U|916
9N6Z|1|L1|U|917
9N6Z|1|L1|U|918
9N6Z|1|L1|A|919
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain LR
- U3 small nucleolar RNA-associated protein 13
- Chain NG
- 40S ribosomal protein S14-A
- Chain NM
- Small ribosomal subunit protein eS1A
Coloring options: