IL_9N72_013
3D structure
- PDB id
- 9N72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State F
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.94 Å
Loop
- Sequence
- GUA*UUUUC
- Length
- 8 nucleotides
- Bulged bases
- 9N72|1|L1|U|260
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N72_013 not in the Motif Atlas
- Homologous match to IL_9PN5_154
- Geometric discrepancy: 0.3096
- The information below is about IL_9PN5_154
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36931.5
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
9N72|1|L1|G|204
9N72|1|L1|U|205
9N72|1|L1|A|206
*
9N72|1|L1|U|259
9N72|1|L1|U|260
9N72|1|L1|U|261
9N72|1|L1|U|262
9N72|1|L1|C|263
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4-A
- Chain L8
- 40S ribosomal protein S8-A
- Chain LV
- Ribosome biogenesis protein ENP2
- Chain SP
- U3 small nucleolar RNA-associated protein 20
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