IL_9NDP_237

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

9NDP|1|K|G|1285, 9NDP|1|K|U|1314

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|G|1281
9NDP|1|K|A|1282
9NDP|1|K|C|1283
9NDP|1|K|A|1284
9NDP|1|K|G|1285
9NDP|1|K|G|1286
9NDP|1|K|A|1287
9NDP|1|K|U|1288
9NDP|1|K|U|1289
9NDP|1|K|G|1290
*
9NDP|1|K|C|1309
9NDP|1|K|U|1310
9NDP|1|K|C|1311
9NDP|1|K|G|1312
9NDP|1|K|A|1313
9NDP|1|K|U|1314
9NDP|1|K|U|1315
9NDP|1|K|C|1316

Current chains

Chain K

18S rRNA

Nearby chains

Chain 0

Ribosomal protein S27a

Chain 9

eS29

Chain RR

40S ribosomal protein S12

Chain SS

S10_plectin domain-containing protein