IL_9OFV_065
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- UGAAU*AGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_065 not in the Motif Atlas
- Geometric match to IL_8CRE_072
- Geometric discrepancy: 0.0936
- The information below is about IL_8CRE_072
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9OFV|1|f|U|1645
9OFV|1|f|G|1646
9OFV|1|f|A|1647
9OFV|1|f|A|1648
9OFV|1|f|U|1649
*
9OFV|1|f|A|1806
9OFV|1|f|G|1807
9OFV|1|f|G|1808
9OFV|1|f|A|1809
9OFV|1|f|A|1810
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain M
- 60S ribosomal protein L27-A
- Chain T
- 60S ribosomal protein L34-A
- Chain d
- 60S ribosomal protein L41-A
- Chain j
- 60S ribosomal protein L2-A
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