IL_9OFV_097
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- AUGAAGC*GGGU
- Length
- 11 nucleotides
- Bulged bases
- 9OFV|1|f|G|2522, 9OFV|1|f|G|2585, 9OFV|1|f|G|2586
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_097 not in the Motif Atlas
- Geometric match to IL_8P9A_324
- Geometric discrepancy: 0.1154
- The information below is about IL_8P9A_324
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52092.1
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
9OFV|1|f|A|2520
9OFV|1|f|U|2521
9OFV|1|f|G|2522
9OFV|1|f|A|2523
9OFV|1|f|A|2524
9OFV|1|f|G|2525
9OFV|1|f|C|2526
*
9OFV|1|f|G|2584
9OFV|1|f|G|2585
9OFV|1|f|G|2586
9OFV|1|f|U|2587
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain b0
- 60S ribosomal protein L25
- Chain i
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
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