IL_9P8I_098

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

GAUGG*CGUU

Length

9 nucleotides

Bulged bases

9P8I|1|L5|U|2485

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|L5|G|2483
9P8I|1|L5|A|2484
9P8I|1|L5|U|2485
9P8I|1|L5|G|2486
9P8I|1|L5|G|2487
*
9P8I|1|L5|C|2492
9P8I|1|L5|G|2493
9P8I|1|L5|U|2494
9P8I|1|L5|U|2495

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L23a