IL_9PJ7_053
3D structure
- PDB id
- 9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UACAGAG*CGGAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ7_053 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.1499
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9PJ7|1|A|U|1233
9PJ7|1|A|A|1234
9PJ7|1|A|C|1235
9PJ7|1|A|A|1236
9PJ7|1|A|G|1237
9PJ7|1|A|A|1238
9PJ7|1|A|G|1239
*
9PJ7|1|A|C|1270
9PJ7|1|A|G|1271
9PJ7|1|A|G|1272
9PJ7|1|A|A|1273
9PJ7|1|A|A|1274
9PJ7|1|A|A|1275
9PJ7|1|A|G|1276
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S7
- Chain J
- 30S ribosomal protein S9
- Chain M
- Small ribosomal subunit protein uS10
- Chain S
- 30S ribosomal protein S14 type Z
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