IL_9PJ7_064
3D structure
- PDB id
- 9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ7_064 not in the Motif Atlas
- Geometric match to IL_8GLP_051
- Geometric discrepancy: 0.1924
- The information below is about IL_8GLP_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9PJ7|1|A|C|1417
9PJ7|1|A|C|1418
9PJ7|1|A|G|1419
9PJ7|1|A|A|1420
9PJ7|1|A|A|1421
9PJ7|1|A|G|1422
*
9PJ7|1|A|C|1453
9PJ7|1|A|G|1454
9PJ7|1|A|A|1455
9PJ7|1|A|A|1456
9PJ7|1|A|G|1457
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- 30S ribosomal protein S20
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain o
- 50S ribosomal protein L19
Coloring options: