IL_9QIW_124
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GAGC*GAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QIW_124 not in the Motif Atlas
- Geometric match to IL_8CRE_440
- Geometric discrepancy: 0.2313
- The information below is about IL_8CRE_440
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
9QIW|1|L5|G|4743
9QIW|1|L5|A|4744
9QIW|1|L5|G|4745
9QIW|1|L5|C|4746
*
9QIW|1|L5|G|4954
9QIW|1|L5|A|4955
9QIW|1|L5|A|4956
9QIW|1|L5|C|4957
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: