IL_9QJC_005
3D structure
- PDB id
- 9QJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast pre-60S Domain II intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAUGUAG*UAUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 9QJC|1|1|U|534, 9QJC|1|1|U|558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QJC|1|1|G|531
9QJC|1|1|A|532
9QJC|1|1|A|533
9QJC|1|1|U|534
9QJC|1|1|G|535
9QJC|1|1|U|536
9QJC|1|1|A|537
9QJC|1|1|G|538
*
9QJC|1|1|U|553
9QJC|1|1|A|554
9QJC|1|1|U|555
9QJC|1|1|U|556
9QJC|1|1|A|557
9QJC|1|1|U|558
9QJC|1|1|A|559
9QJC|1|1|G|560
9QJC|1|1|C|561
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L14-A
- Chain S
- 60S ribosomal protein L20-A
Coloring options: