IL_9QQA_060

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACAGGA(OMU)UG*CUCGAUUC

Length

18 nucleotides

Bulged bases

9QQA|1|A2|G|1286

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|A2|G|1282
9QQA|1|A2|A|1283
9QQA|1|A2|C|1284
9QQA|1|A2|A|1285
9QQA|1|A2|G|1286
9QQA|1|A2|G|1287
9QQA|1|A2|A|1288
9QQA|1|A2|OMU|1289
9QQA|1|A2|U|1290
9QQA|1|A2|G|1291
*
9QQA|1|A2|C|1310
9QQA|1|A2|U|1311
9QQA|1|A2|C|1312
9QQA|1|A2|G|1313
9QQA|1|A2|A|1314
9QQA|1|A2|U|1315
9QQA|1|A2|U|1316
9QQA|1|A2|C|1317

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AC

Ubiquitin-ribosomal protein eS31 fusion protein

Chain AG

Small ribosomal subunit protein uS14

Chain Aj

S10_plectin domain-containing protein

Chain Al

Small ribosomal subunit protein eS12