IL_9QQB_067
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 9QQB|1|A2|C|1332, 9QQB|1|A2|U|1495, 9QQB|1|A2|G|1498
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_067 not in the Motif Atlas
- Geometric match to IL_8P9A_439
- Geometric discrepancy: 0.107
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99893.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9QQB|1|A2|U|1330
9QQB|1|A2|G|1331
9QQB|1|A2|C|1332
9QQB|1|A2|A|1333
9QQB|1|A2|U|1334
9QQB|1|A2|G|1335
9QQB|1|A2|G|1336
*
9QQB|1|A2|U|1493
9QQB|1|A2|C|1494
9QQB|1|A2|U|1495
9QQB|1|A2|G|1496
9QQB|1|A2|U|1497
9QQB|1|A2|G|1498
9QQB|1|A2|A|1499
9QQB|1|A2|U|1500
9QQB|1|A2|G|1501
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AC
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain AG
- Small ribosomal subunit protein uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Aj
- S10_plectin domain-containing protein
- Chain At
- Small ribosomal subunit protein uS10
Coloring options: