IL_9QQB_099
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_099 not in the Motif Atlas
- Geometric match to IL_4WF9_008
- Geometric discrepancy: 0.1526
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84694.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9QQB|1|B5|C|30
9QQB|1|B5|U|31
9QQB|1|B5|G|32
9QQB|1|B5|A|33
9QQB|1|B5|A|34
9QQB|1|B5|U|35
9QQB|1|B5|U|36
9QQB|1|B5|U|37
*
9QQB|1|B5|A|44
9QQB|1|B5|U|45
9QQB|1|B5|U|46
9QQB|1|B5|A|47
9QQB|1|B5|G|48
9QQB|1|B5|U|49
9QQB|1|B5|C|50
9QQB|1|B5|A|51
9QQB|1|B5|G|52
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BL
- Large ribosomal subunit protein eL13
- Chain BN
- Ribosomal protein L15
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bj
- Ribosomal protein L37
- Chain Bo
- Large ribosomal subunit protein eL42
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