IL_9RU7_024

3D structure

PDB id

9RU7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9RU7|1|L5|G|748, 9RU7|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU7|1|L5|G|745
9RU7|1|L5|A|746
9RU7|1|L5|A|747
9RU7|1|L5|G|748
9RU7|1|L5|G|749
9RU7|1|L5|U|750
9RU7|1|L5|G|751
9RU7|1|L5|G|752
*
9RU7|1|L5|U|911
9RU7|1|L5|G|912
9RU7|1|L5|U|913
9RU7|1|L5|U|914
9RU7|1|L5|A|915
9RU7|1|L5|C|916
9RU7|1|L5|A|917
9RU7|1|L5|G|918
9RU7|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

Large ribosomal subunit protein eL14

Chain LS

60S ribosomal protein L18a