IL_9SYR_034

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9SYR|1|L1|G|748, 9SYR|1|L1|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|G|745
9SYR|1|L1|A|746
9SYR|1|L1|A|747
9SYR|1|L1|G|748
9SYR|1|L1|G|749
9SYR|1|L1|U|750
9SYR|1|L1|G|751
9SYR|1|L1|G|752
*
9SYR|1|L1|U|911
9SYR|1|L1|G|912
9SYR|1|L1|U|913
9SYR|1|L1|U|914
9SYR|1|L1|A|915
9SYR|1|L1|C|916
9SYR|1|L1|A|917
9SYR|1|L1|G|918
9SYR|1|L1|C|919

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L14

Chain Lj

60S ribosomal protein L18a