IL_9SYR_034
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GAAGGUGG*UGUUACAGC
- Length
- 17 nucleotides
- Bulged bases
- 9SYR|1|L1|G|748, 9SYR|1|L1|C|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_034 not in the Motif Atlas
- Homologous match to IL_8GLP_040
- Geometric discrepancy: 0.1294
- The information below is about IL_8GLP_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25001.3
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9SYR|1|L1|G|745
9SYR|1|L1|A|746
9SYR|1|L1|A|747
9SYR|1|L1|G|748
9SYR|1|L1|G|749
9SYR|1|L1|U|750
9SYR|1|L1|G|751
9SYR|1|L1|G|752
*
9SYR|1|L1|U|911
9SYR|1|L1|G|912
9SYR|1|L1|U|913
9SYR|1|L1|U|914
9SYR|1|L1|A|915
9SYR|1|L1|C|916
9SYR|1|L1|A|917
9SYR|1|L1|G|918
9SYR|1|L1|C|919
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain LQ
- 60S ribosomal protein L14
- Chain Lj
- 60S ribosomal protein L18a
Coloring options: