IL_9SYR_250

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

9SYR|1|S1|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|C|1708
9SYR|1|S1|G|1709
9SYR|1|S1|C|1710
9SYR|1|S1|U|1711
*
9SYR|1|S1|A|1822
9SYR|1|S1|A|1823
9SYR|1|S1|A|1824
9SYR|1|S1|A|1825
9SYR|1|S1|G|1826

Current chains

Chain S1

18S rRNA

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain S2

mRNA

Chain Sg

Small ribosomal subunit protein uS12

Chain Sn

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

Chain Sq

60S ribosomal protein L41