IL_9T0Z_035
3D structure
- PDB id
- 9T0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- HPFcold Bound Hibernating C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 9T0Z|1|A|A|662
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T0Z_035 not in the Motif Atlas
- Homologous match to IL_6CZR_141
- Geometric discrepancy: 0.1677
- The information below is about IL_6CZR_141
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9T0Z|1|A|U|659
9T0Z|1|A|A|660
9T0Z|1|A|G|661
9T0Z|1|A|A|662
9T0Z|1|A|G|663
*
9T0Z|1|A|U|737
9T0Z|1|A|G|738
9T0Z|1|A|G|739
9T0Z|1|A|A|740
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein bS6
- Chain O
- Small ribosomal subunit protein uS15
- Chain R
- Small ribosomal subunit protein bS18
- Chain U
- Small ribosomal subunit protein bS21
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